RG
Publications
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An Ensemble Approach to the Origin of Life
Origin of Life via Archaea, Chapter 8
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The Molecular Basis of Differentiation Wave Activity in Embryogenesis
BioSystems, 105272
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Embodied Cognitive Morphogenesis as a Route to Intelligent Systems
Royal Society Interface Focus, 20220067
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The Psychophysical World of the Motile Diatom Bacillaria Paradoxa
Mathematics and Biology of Diatoms, Chapter 9
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Data-theoretical Synthesis of the Early Developmental Process
Neuroinformatics
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Towards a Digital Diatom: Image Processing and Deep Learning Analysis of Bacillaria paradoxa Dynamic Morphology
Diatom Gliding Motility
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Cell Differentiation Processes as Spatial Networks: Identifying Four-dimensional Structure in Embryogenesis
BioSystems, 173, 235–246
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Embryo Networks and Connectomes in Caenorhabditis elegans
Open Science Framework
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Morphogenetic Processes as Data: Quantitative Structure in the Drosophila Eye Imaginal Disc
BioSystems, 173, 256–265
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OpenWorm: Overview and Recent Advances in Integrative Biological Simulation of Caenorhabditis elegans
Philosophical Transactions of the Royal Society B, 373, 20170382
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Information Isometry Technique Reveals Organizational Features in Developmental Cell Lineages
bioRxiv
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Morphozoic: Cellular Automata with Nested Neighborhoods as a Metamorphic Representation of Morphogenesis
Multi-Agent Based Simulations Applied to Biological and Environmental Systems, Chapter 3
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Quantifying Mosaic Development: Towards an Evo-Devo Postmodern Synthesis of the Evolution of Development via Differentiation Trees of Embryos
Biology, 5(3), 33
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DevoWorm: Raising the Worm on Datapoints, Trees, and Matrices
20th International C. elegans Conference, Los Angeles, CA
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Network Architecture of Embryo Developmental Regulation
Network Frontiers Workshop, Northwestern University
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DevoWorm: Differentiation Waves and Computation in C. elegans Embryogenesis
bioRxiv